Insertion junction: CLIP2.040518_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040518
Chromosome:chromosome 10
Location:876135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423700 (1 of 1) PF07985 - SRR1 (SRR1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCTGCTGCTGCTGCTGCTGCTGCTCCGGCTGCTGCGCCGCCTCCTGT
Internal bar code:GGAGTGATAAGTACCACATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4250
LEAP-Seq percent confirming:92.9577
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TAACAGAGGGAGGGACGGAG
Suggested primer 2:TAGCAACTGAGCTTGGGGTG