Insertion junction: CLIP2.040529_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040529
Chromosome:chromosome 12
Location:7573870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556000 ECP88 88 kDa extracellular polypeptide; (1 of 5) PF06742//PF06863 - Protein of unknown function (DUF1214) (DUF1214) // Protein of unknown function (DUF1254) (DUF1254) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTTTGCGGGGGCCGCCAGGGCCGTTGGTGCGTTGCTTCATTATACCAG
Internal bar code:CGAGCTGATAGGTGTACACGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2421
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGGTGGTGAGCTATCGG
Suggested primer 2:GCCTGAGTCTGAGGTTGCAT