Insertion junction: CLIP2.040532_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040532
Chromosome:chromosome 16
Location:2351154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659150 (1 of 7) PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGCCGTACGAGGGCGGTAGGTTGCCCACGAACACCGTGCGCCGCAGC
Internal bar code:ACGTTGGGGCTCCCGCTTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2124
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCTCTCAGACGATGACG
Suggested primer 2:CGTGTGTGTGTGGCTTTGAG