Insertion junction: CLIP2.040538_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040538
Chromosome:chromosome 12
Location:686105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493000 (1 of 1) IPR006153//IPR020846 - Cation/H+ exchanger // Major facilitator superfamily domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGGCGGTGGTGGTGGGGTGGGGGGTTGGCAAGATGGCACAGAGAAT
Internal bar code:ATGTTCAAGCATTTCAAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:244
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGCTATCCTCTAACTCG
Suggested primer 2:GAACGTGATCATCTTGCGCC