Insertion junction: CLIP2.040541_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040541
Chromosome:chromosome 9
Location:1896357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397450 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGCGCAGCTGCGGGCAGCTTAGGAAGGGGCGCGCTGGCGGCGGAAGC
Internal bar code:CCACTCTTCATGGTACTTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1948
LEAP-Seq percent confirming:53.5714
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCGATACTAGTGCGCTG
Suggested primer 2:CCTGTTTTCCTTGCAGCACC