Insertion junction: CLIP2.040549_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040549
Chromosome:chromosome 13
Location:3843983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589400 PRL6 (1 of 14) PTHR10334 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED; Predicted extracellular protein 3'UTR
lncRNA_TCONS_00019120 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCATGCTTACCGCGACAGTAGTGCGTGAGACCACGCGGGGAAGGGGTA
Internal bar code:TTAGTACGTGCGTTCGTACAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2579
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGTAACCTCTGTGCAT
Suggested primer 2:GAGCGCTCGTTTGCATGTAG