Insertion junction: CLIP2.040549_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040549
Chromosome:chromosome 13
Location:3849038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589400 PRL6 (1 of 14) PTHR10334 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED; Predicted extracellular protein 3'UTR
lncRNA_TCONS_00019120 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCGGGCCCAATATCCTATCGCAGCACTAATGCCCGAAACTACGATGA
Internal bar code:TGTTTCTATAGTTGCTCACATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4982
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:126
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:126

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGCTCGTTTGCATGTAG
Suggested primer 2:GGGCAGTAACCTCTGTGCAT