Insertion junction: CLIP2.040553_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040553
Chromosome:chromosome 13
Location:3406411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586800 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTAAAGGTGGTCATGAAGATGGTCCTGTCGGTGTGCTCATGGCTCGGC
Internal bar code:AACTCGAGAGGAGTGTTTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4011
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGATATGTTGCCACAGC
Suggested primer 2:CGTTGAAGCAGTCGCATACG