Insertion junction: CLIP2.040555_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040555
Chromosome:chromosome 6
Location:4681051
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278700 Conserved Ankyrin-Repeat Protein; (1 of 1) PTHR24193:SF69 - IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574 HOMOLOG-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTCGCGGCTGCGGCTGCGTGAGGAGGTGGAGCAAGTGGCGGCGGACGA
Internal bar code:TGAAAGGCCGTGGTTCGCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4058
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCTCTCACACACAGCAC
Suggested primer 2:TACGACACGTGCGTTGGTAA