Insertion junction: CLIP2.040558_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040558
Chromosome:chromosome 6
Location:5497699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286450 (1 of 1) PTHR22847//PTHR22847:SF489 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCCACGGCCACTGCGGCGCCCTTCCCGGCACCACGACACATCCGCTG
Internal bar code:CGGAACAATTGGTATAATACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:644
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGTACCTGCCTACGCCT
Suggested primer 2:ACAACGCGTGCTACAGTACA