Insertion junction: CLIP2.040564_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040564
Chromosome:chromosome 3
Location:6209463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191350 (1 of 1) K05642 - ATP-binding cassette, subfamily A (ABC1), member 2 (ABCA2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCAGCCCCAGGCCTCACCCTAGCAATTGGTTGTAGGTGTTCCAGATG
Internal bar code:ACTCATGGAGTCGGAGCCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3998
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCACCTCGATTGCCTCAG
Suggested primer 2:CCAAGGCATGTGAAGGGCTA