Insertion junction: CLIP2.040565_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040565
Chromosome:chromosome 1
Location:6076976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043000 (1 of 1) PTHR30544//PTHR30544:SF6 - 23S RRNA METHYLTRANSFERASE // RADICAL SAM DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGGCCATGGCTAGCCGCCTGGTGCATGTTGGGCCTCCTCGTGCCGTG
Internal bar code:TTTTGCTTTCACGGTAAGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2139
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCATACCCTCATCGGAG
Suggested primer 2:GCGTAGTAATCGCCGAGACA