Insertion junction: CLIP2.040567_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040567
Chromosome:chromosome 6
Location:7259023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800731 (1 of 17) PF00415 - Regulator of chromosome condensation (RCC1) repeat (RCC1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATCCCCCCAGCAATAGACTTCTTGAAGGCGTGTAGATACTGCATCAA
Internal bar code:GAGCGTGTATATGCTGTCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2611
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTATATTGCGGCAGCCAT
Suggested primer 2:TCTCACGTCCAAGCTGACAC