Insertion junction: CLIP2.040571_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040571
Chromosome:chromosome 3
Location:5101710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180500 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGTGGCATGTTAGAATGTTCGTGGGCGGTCAGGAGCACACATGGTGC
Internal bar code:GCTTCCGGCGTAGGCTCAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5434
LEAP-Seq percent confirming:93.1818
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTACAGGTGCACTTCT
Suggested primer 2:CTGAGGCAGTAGCAGCTGTT