Insertion junction: CLIP2.040571_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040571
Chromosome:chromosome 3
Location:5101715
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180500 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGAAAGTGTGGGTAACTAGCGGGTCAGCGCAGCCGAGACTCTCACACC
Internal bar code:GCTTCCGGCGTAGGCTCAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:985
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGGCAGTAGCAGCTGTT
Suggested primer 2:GGCTGTACAGGTGCACTTCT