Insertion junction: CLIP2.040575_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040575
Chromosome:chromosome 7
Location:985187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319320 ACD2 1-aminocyclopropane-1-carboxylate deaminase; (1 of 1) PTHR10314//PTHR10314:SF79 - SER/THR DEHYDRATASE, TRP SYNTHASE // DOF-TYPE TRANSCRIPTION FACTOR TMO6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAGCTGCAGGTAGCTAGAGCTGACGCGGGCGAGGGCTGGGGCTGGAG
Internal bar code:ACTTAGCTCCCGGACCACTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1091
LEAP-Seq percent confirming:9.67742
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGCCTCCAGTCCAATCG
Suggested primer 2:GACAGGTGGGGACTAGGGAT