Insertion junction: CLIP2.040576_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040576
Chromosome:chromosome 17
Location:1270163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705200 (1 of 1) IPR001480//IPR003072//IPR008752 - Bulb-type lectin domain // Orphan nuclear receptor, NOR1 type // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGTCCAGGTTTGGCCCGTTGAAACTCCTTCTACGGGAGTTATGCAGG
Internal bar code:AAATAGAGCCCTATAGACGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2921
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTCTTTTGTTGCGGCCC
Suggested primer 2:GCTGGTGCTACTACTGCCAA