Insertion junction: CLIP2.040579_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040579
Chromosome:chromosome 6
Location:8356127
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307600 (1 of 1) K11290 - template-activating factor I (SET, TAF1, I2PP2A); Nucleosome assembly protein CDS
Cre06.g307650 (1 of 1) PF12138 - Spherulation-specific family 4 (Spherulin4) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGGCGAGGGCGAGGAGGCGGGCGGGCTGGAGGCCGGCGAGGGCGAG
Internal bar code:TATATTGCGGACGGCTCGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3295
LEAP-Seq percent confirming:63.1579
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCACTGCTCTGCCTGTA
Suggested primer 2:TGAACAGCGCAACGTTGAAG