Insertion junction: CLIP2.040595_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040595
Chromosome:chromosome 8
Location:2242322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370500 (1 of 1) IPR013024//IPR017939 - Butirosin biosynthesis, BtrG-like // Gamma-glutamylcyclotransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGGTATGGTCCAGGGAGTAGTGACCGTGAATGCGCTACGGGAGTGCA
Internal bar code:GAGACTCAGATTGGTAGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1020
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AACACACGAAACATTGGCGG
Suggested primer 2:TCTTTGCACAGTCGGGATCC