Insertion junction: CLIP2.040596_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040596
Chromosome:chromosome 16
Location:7740773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686958 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTAAGCCCCGCCGACATGCTGCGGTGCCCCGTACCCAACCGCCCCATA
Internal bar code:ATTTTTTCAGCTACTAGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4334
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GAATTCGCGACCTTCATGGC
Suggested primer 2:CCAAAAGGCACTCCGTGTTG