Insertion junction: CLIP2.040598_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040598
Chromosome:chromosome 9
Location:2616258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392251 (1 of 28) 2.7.7.6 - DNA-directed RNA polymerase / RNA polymerase III CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACCCCACACTGCCGGTCGCCGACCCGCGCTACCCCTACCTGCACCTC
Internal bar code:TTATATGTGCAATTCATAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTCAGTTTTGGCATTGG
Suggested primer 2:CCCACCTATCCACCCACCTA