Insertion junction: CLIP2.040599_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040599
Chromosome:chromosome 7
Location:2595103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330050 (1 of 1) IPR000571//IPR029063 - Zinc finger, CCCH-type // S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTGTGTGTTAAAAAAACGAAACGAAAGCCCGCCCAGACGTGTG
Internal bar code:TGGCTGAGAGTACAGTGAACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:548
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCCCCTCTCCCTGAAGA
Suggested primer 2:TGGATCCATGAGTCACCCCT