Insertion junction: CLIP2.040605_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040605
Chromosome:chromosome 13
Location:735699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566600 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCGCAGCAGCCGCTGCTGCTGCCACAGCCACAGCCGTGGCAGCGGCG
Internal bar code:TCGGTTAGGGTGTGTGTATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCTGCTACCTCCGAGTC
Suggested primer 2:GAGCAGTATCACTACCCCGC