Insertion junction: CLIP2.040610_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040610
Chromosome:chromosome 5
Location:1530398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234662 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACACAAATACTGGTGCTCTCGCAGCCGACCACAAGGAACGCGCCCTGG
Internal bar code:TTGTAGCGCACTATTAGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1823
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTAGTAGGCCTGTGGGGA
Suggested primer 2:ACTTTATCCACCGGTGCGTT