Insertion junction: CLIP2.040611_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040611
Chromosome:chromosome 3
Location:5648868
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186300 DII2,FAP146,p38 p38 protein Associated with Inner Arm Dynein d; (1 of 26) IPR011990 - Tetratricopeptide-like helical domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCTCAGCGCACACACACACACACACACACACAGTTATCATCTCTACA
Internal bar code:CTTGGCCACGACCTAAGGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:485
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGGCTGGACCATATTCTC
Suggested primer 2:GAGCTATTCCAGGAGTCGCC