Insertion junction: CLIP2.040619_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040619
Chromosome:chromosome 9
Location:6386470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414600 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACAGTTCCGCCAGCTCTGCCTGTTGTTTGAATGAAGCAGTACAGAG
Internal bar code:CGAGGGATCCATGTTATGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:275
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCTTGGCTCCTTAGTTG
Suggested primer 2:ACGCGAAAATTTTGGGGGTG