Insertion junction: CLIP2.040628_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040628
Chromosome:chromosome 3
Location:6850773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197550 TMEM48,NDC1 (1 of 1) K14315 - nucleoporin NDC1 (NDC1, TMEM48); Nuclear pore protein NDC1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGATGCCCAGCTTAGGAAAGGTCACCGGCGCGAACTCGTTCGACGCCA
Internal bar code:TACTAGGAACAGTTGCTTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3963
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:115
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:138

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAGGCATCATTCAAGCG
Suggested primer 2:CTGCAGCCTCTCTGTGAACA