Insertion junction: CLIP2.040630_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040630
Chromosome:chromosome 7
Location:3539714
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336350 (1 of 1) PTHR24012//PTHR24012:SF432 - FAMILY NOT NAMED // HEPHAESTUS CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGGTTTGGGTGATCGACCACCGCTGGCGCGGAGTCTTTGATAGCGAC
Internal bar code:TCTTGCGGGTTCATCATTGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1996
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:TGACATCTGCTCTTGTGCGT
Suggested primer 2:AGTGTGTGTTGTGAAGGGCA