Insertion junction: CLIP2.040633_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040633
Chromosome:chromosome 11
Location:3545451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477850 TXC1,TSN1 (1 of 1) K15979 - staphylococcal nuclease domain-containing protein 1 (SND1); Transcriptional coactivator-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAACTGAGGAGGATTGGCCGTATCCGCAGGCATTCCCCCAACCTCTCC
Internal bar code:CTGGCAAGGGAATTATGTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:575
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACCTTGACGT
Suggested primer 2:TGTGACAAGTGTGTGGCCTT