Insertion junction: CLIP2.040636_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040636
Chromosome:chromosome 1
Location:3103289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019750 (1 of 1) PTHR10871:SF4 - DNA TOPOISOMERASE 6 SUBUNIT B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGGCTGGTCGTTGGGTCTTGGGGTTGGAATAGCCCCACCCCACTGTTC
Internal bar code:GTAATCGGCATTTTTTAAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:77
LEAP-Seq percent confirming:3.57143
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGTGTGGGTGGGGTAGG
Suggested primer 2:ACGAAAGCACAGGTGGAGAG