Insertion junction: CLIP2.040638_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040638
Chromosome:chromosome 10
Location:5108605
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g455190 (1 of 1) PF04989 - Cephalosporin hydroxylase (CmcI) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTACTTCATCAGCTCAAGCACGCTGGCCCAGATGAGGGCGCTGCCGCC
Internal bar code:TATAAGGCTTATTCATTACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:679
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTCCTGTTCGACCTGCT
Suggested primer 2:GTGCTGGCAAGACCTTTGTG