Insertion junction: CLIP2.040644_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040644
Chromosome:chromosome 13
Location:1967385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576500 (1 of 1) PTHR35698//PTHR35698:SF1 - FAMILY NOT NAMED // DNA-BINDING PROTEIN RHL1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTGCGTGTGTTGTCAGGAGCCCGCGTAAACACAGCTCAAATCTTAAT
Internal bar code:AGTACGGGGTAGGTATGCCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1504
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGCTGGGCTTAGGAAAC
Suggested primer 2:CGCGAATCGGGACTACAGAA