Insertion junction: CLIP2.040646_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040646
Chromosome:chromosome 5
Location:2970955
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230700 (1 of 274) IPR020683 - Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCATGGGGGGTTAATGGAGGGCATGGTTCGGCCTTCGTTTGTGTTG
Internal bar code:CCACCAACCGACTATGATCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:507
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCTTCTGTCCTTCAGTC
Suggested primer 2:GGGAGGACGACGACTTTGTT