Insertion junction: CLIP2.040666_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040666
Chromosome:chromosome 10
Location:2619415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436950 Putative nucleolar protein; (1 of 4) PF07534 - TLD (TLD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGGGCGGGCTTCTCCTCATGCACTTGGGGCTGCGGGATGGTTTAATA
Internal bar code:TGTAAGACTCTACTAGGCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1541
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACAACGACGGCTCTAAA
Suggested primer 2:GCCAGAAGACTAAATGCGCG