Insertion junction: CLIP2.040671_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040671
Chromosome:chromosome 12
Location:9138314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543800 CDS
Cre12.g543850 (1 of 1) PF09497 - Transcription mediator complex subunit Med12 (Med12) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGAAGGAGCCGGCACGGGGCAAGCTGGACGAGGGCGCGGACTGGGCG
Internal bar code:TTGAAAGCCCTCGGGTTGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2357
LEAP-Seq percent confirming:26.2295
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACTACCGTAGACTGCGT
Suggested primer 2:ATAATGTAGCGCGCTCTGCT