Insertion junction: CLIP2.040673_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040673
Chromosome:chromosome 12
Location:8304399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551100 (1 of 1) PTHR36356:SF1 - EXPRESSED PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACCCTTCTTCATCGCCTGGTTGGCCTTTTTTTCTAACTCCTGCTCCC
Internal bar code:TCTTAGGGGGACGCGTAATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2317
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTCGTCATCAGCCATTC
Suggested primer 2:GCCTTGTCTTTGGCCTGTTG