Insertion junction: CLIP2.040674_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040674
Chromosome:chromosome 3
Location:5456431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184250 CAM9 Calmodulin-like protein; (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGTGGGCAGGGACCAGGTGGGGGTGCAGGAGCAATGTGTGCAAAGGT
Internal bar code:CATGGTTAAGTCGGCAAGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3032
LEAP-Seq percent confirming:81.9444
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTTTTTGGTGTCGCGGT
Suggested primer 2:CCGCCGTATGTCTGTCTCTC