Insertion junction: CLIP2.040676_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040676
Chromosome:chromosome 12
Location:5898039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533550 PYK1 (1 of 1) PTHR11817:SF5 - PYRUVATE KINASE-RELATED; Pyruvate kinase 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTGGCCTCAGTGCGCCGCAAGCAAGCTCCGTGGATGGCCACCAGCGC
Internal bar code:TTATCTGTTCCTAAAGGAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2164
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTTTCACAACCACACGG
Suggested primer 2:ACTCCTCTCTCTCACGGGAC