Insertion junction: CLIP2.040677_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040677
Chromosome:chromosome 5
Location:2526502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239300 (1 of 85) IPR009057 - Homeodomain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTCTTACACATCACGGTGGCTGAGCAAAGGCTGAGCAAATACTGAAC
Internal bar code:AGAACGACTTCGCGCATACGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2034
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGATGGGTACGGAGATG
Suggested primer 2:GGCGGTCATGACGATGAGAT