Insertion junction: CLIP2.040686_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040686
Chromosome:chromosome 4
Location:2399337
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221350 (1 of 19) IPR003034 - SAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTACCCGCAAAAAGCCTGGAACCCCCCCCTCGGGCGATCGACGAACGA
Internal bar code:GGAGCGTGTATACATGGGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:666
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGGAGGACCAGGGAAAG
Suggested primer 2:ACTGCTTCCACTCCACGAAG