Insertion junction: CLIP2.040689_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040689
Chromosome:chromosome 13
Location:5062702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606600 CGK1 cGMP-dependent protein kinase; (1 of 6) K07376 - protein kinase, cGMP-dependent (PRKG) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGCTCGGGCGTTGTCGTCATCACGCGCGCCTCGCCGTGCTTCAGCTC
Internal bar code:CTTATACGTGTACTACAGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:983
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTACATGGCCTCAGGTCA
Suggested primer 2:TCAGGTCACAACAGCGAGTC