Insertion junction: CLIP2.040693_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040693
Chromosome:chromosome 16
Location:3588300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670261 (1 of 1) K15305 - vacuole morphology and inheritance protein 14 (VAC14, TAX1BP2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGTGAGGCGCGCCGGCGGCACCATATCCAGCACCCGCACCTGCAGCC
Internal bar code:GTAGCCGTAGTGCTGCCTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3202
LEAP-Seq percent confirming:98.913
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTCTCAGTGGACAGTCG
Suggested primer 2:CGGCAATCACAACACAAGCA