Insertion junction: CLIP2.040706_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040706
Chromosome:chromosome 6
Location:3857879
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278182 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAGCACACCTCCCCCTATGCGCTGCCCATACCGCATGCCGCCCATCC
Internal bar code:GCACGTATCCGGCTTCCTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2798
LEAP-Seq percent confirming:92.7273
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAAGGACACACATGGACA
Suggested primer 2:CCGTATCGAAGCGCCTTTTG