Insertion junction: CLIP2.040708_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040708
Chromosome:chromosome 8
Location:3823428
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381450 OPR35 OctotricoPeptide Repeat protein 35 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGGCTTGGGGGTTGGCGGAGTGATGAACGGTAATTGGAAGGGGGCG
Internal bar code:CATACAGGGAATCGGCGTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCGCCTGCTATACTACC
Suggested primer 2:CCTTTATCGTTTCGGCGCTG