Insertion junction: CLIP2.040723_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040723
Chromosome:chromosome 6
Location:6357360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293150 PGM12 (1 of 2) PTHR23029:SF12 - PHOSPHOMUTASE PMU1-RELATED; Phosphoglycerate mutase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCCACTGACGCCGCCCCTGCCTTCGTAAGATACGAGCGCTGCACAGA
Internal bar code:ATTCGCGTTCGGAGTGCTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5342
LEAP-Seq percent confirming:1.2987
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:76
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGCGTCATATTACGGGAA
Suggested primer 2:AGCGCTCGTATCTTCCTTCG