Insertion junction: CLIP2.040723_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040723
Chromosome:chromosome 16
Location:7316533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678773 BSD2,BHSD2 (1 of 1) PTHR10366//PTHR10366:SF355 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED; 3-beta hydroxysteroid dehydrogenase intron
lncRNA_TCONS_00188791 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGAGACCGCGAGCACTGCCTGGGGCCCTCAGATGCAGCCTGCGCCAC
Internal bar code:TTGTCAAAAGGTCTCGAGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:6677
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGTTGTACATGTGCAAA
Suggested primer 2:TCGATATGGCGGGATGTGTG