Insertion junction: CLIP2.040723_5

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040723
Chromosome:chromosome 16
Location:7326528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678773 BSD2,BHSD2 (1 of 1) PTHR10366//PTHR10366:SF355 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED; 3-beta hydroxysteroid dehydrogenase intron
lncRNA_TCONS_00188791 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCCACAAAAAGCACCGCATGAAGAAAGGTTACGGTACGCACGACTGG
Internal bar code:TCTTACGTTCTTAGAATACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1150
LEAP-Seq percent confirming:2.04082
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATATGGCGGGATGTGTG
Suggested primer 2:CCGCGTTGTACATGTGCAAA