Insertion junction: CLIP2.040725_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040725
Chromosome:chromosome 12
Location:9035872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544750 (1 of 1) PF13637//PF13857 - Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCGGCTGCCTGCGAAGTGGTAGAGGCGGCGGCAGCCGCTGCGGCTGC
Internal bar code:TCATATAATTAGGTCTGGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:395
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCCATAGGAGGTCATGGT
Suggested primer 2:GAGGGCAGAAAGGAGGGAAC