Insertion junction: CLIP2.040725_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040725
Chromosome:chromosome 12
Location:9035883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544750 (1 of 1) PF13637//PF13857 - Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCCGACGGGGCGGCCGCCTCGGGCGCGGCAGCGGCTGCGGCTGCCGC
Internal bar code:TCATATAATTAGGTCTGGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGCAGAAAGGAGGGAAC
Suggested primer 2:AGGCCATAGGAGGTCATGGT