Insertion junction: CLIP2.040726_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040726
Chromosome:chromosome 16
Location:5511691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682350 (1 of 1) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGTGCGACATAAGCAGTCAGGTGATGACTTCAGTGACCAAAGCCAGA
Internal bar code:GCGCTTAGTGGGCTTTTGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:869
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTCCAAGTACAGCACCT
Suggested primer 2:TCTTCACCGTCTTGCAGGAC